STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hCDK2Predicted protein; Belongs to the protein kinase superfamily. (347 aa)    
Predicted Functional Partners:
CYCB1
Predicted protein; Belongs to the cyclin family.
      
 0.649
dsCYC6
Predicted protein.
    
 
 0.641
B7FUN1_PHATC
Predicted protein; Belongs to the protein kinase superfamily.
 
  
  0.630
dsCYC2
Predicted protein.
      
 0.629
CYCP6
Predicted protein.
      
 0.606
B7G4G4_PHATC
Predicted protein; Belongs to the protein kinase superfamily.
  
  
 0.574
Gamma-tub
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
 
   
  0.521
CDKA2
Predicted protein; Belongs to the protein kinase superfamily.
  
 
0.505
PHATR_36789
Predicted protein.
   
 
 0.484
CYCH1
Predicted protein.
   
 
 0.484
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.