STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FTC4_PHATCNascent polypeptide-associated complex subunit beta. (153 aa)    
Predicted Functional Partners:
B7G862_PHATC
Predicted protein.
   
 
 0.999
B7FTF1_PHATC
Predicted protein.
    
   0.996
B7FY06_PHATC
Predicted protein.
   
 
 0.985
B7FUV3_PHATC
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.950
B7G383_PHATC
Nuclear pore protein.
   
   0.943
PHATR_25577
Predicted protein.
   
 
 0.941
PHATR_46735
Predicted protein.
   
   0.940
B7FWJ5_PHATC
Predicted protein.
   
   0.937
B7G7F1_PHATC
Predicted protein.
   
   0.937
B7G5I7_PHATC
Predicted protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.932
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.