STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FTN8_PHATCPredicted protein. (260 aa)    
Predicted Functional Partners:
B7G4G0_PHATC
Lysophospholipase.
  
  
 
0.911
B7FVR2_PHATC
Predicted protein.
    
 
 0.614
B7G865_PHATC
Predicted protein.
    
 
 0.567
Ras1
Predicted protein.
   
 
  0.499
B7FZZ4_PHATC
Predicted protein.
   
 
  0.499
PHATR_28215
Predicted protein.
     
 0.477
B7G247_PHATC
Predicted protein.
     
 0.477
B7G294_PHATC
Predicted protein.
     
 0.477
B7G3I8_PHATC
Predicted protein.
     
 0.477
PHATR_10362
Predicted protein.
     
 0.471
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.