STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FVU9_PHATCPredicted protein. (319 aa)    
Predicted Functional Partners:
B7FQN0_PHATC
Predicted protein.
    
 
 0.863
B7FR72_PHATC
Predicted protein.
   
 
 0.698
B7FPR6_PHATC
Predicted protein.
    
   0.647
B7G2A9_PHATC
Predicted protein.
    
 
 0.606
B7GEC7_PHATC
Predicted protein; Belongs to the DEAD box helicase family.
   
 
 0.584
B7G7B4_PHATC
Predicted protein.
    
 
 0.556
B7GDQ3_PHATC
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.555
B7G1I2_PHATC
Predicted protein.
   
 
 0.548
B7FYQ7_PHATC
Predicted protein.
   
   0.538
B7G6V2_PHATC
Predicted protein.
    
 
 0.522
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.