STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FVW8_PHATCPredicted protein. (250 aa)    
Predicted Functional Partners:
PHATR_46838
Predicted protein.
   
 0.999
B7FT17_PHATC
Predicted protein.
   
 0.999
B7FUY0_PHATC
Predicted protein.
   
 0.896
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2.
   
 
 0.896
Pt-separase
Separase protein.
   
 
 0.792
Pt-BUB3
WD40 mitotic checkpoint-like protein similar to spleen mitotic checkpoint BUB3.
     
 0.699
B7G8V9_PHATC
Predicted protein.
   
    0.680
PHATR_10628
Serine/threonine-protein kinase PLK.
   
 
 0.677
B7FV98_PHATC
Predicted protein.
   
 
 0.658
B7FYQ6_PHATC
Predicted protein.
   
 
 0.658
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.