STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FWD4_PHATCPredicted protein. (947 aa)    
Predicted Functional Partners:
B7FWD3_PHATC
Predicted protein.
 
     0.951
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.751
B7G4A8_PHATC
Predicted protein.
    
 0.736
B7FZ68_PHATC
Predicted protein.
    
 0.728
PHATR_43821
Predicted protein.
    
 0.672
UBI3
Ubiquitin extension protein 3.
    
  0.662
B7FWC9_PHATC
RuvB-like helicase; Belongs to the RuvB family.
    
 0.613
B7FS37_PHATC
Predicted protein.
    
 0.597
B7FWL0_PHATC
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.571
NURF-55
Chromatin assembly factor subunit c.
    
 0.563
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.