STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FWR6_PHATCPredicted protein. (346 aa)    
Predicted Functional Partners:
LIS1_PHATC
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. Belongs to the WD repeat LIS1/nudF family.
   
 0.771
PHATR_10628
Serine/threonine-protein kinase PLK.
   
 0.665
B7FUY0_PHATC
Predicted protein.
     
 0.657
B7FWX1_PHATC
Predicted protein.
     
 0.657
B7FP98_PHATC
Predicted protein.
   
 
  0.652
Pt-MAD1
Mitotic spindle assembly checkpoint protein.
    
  0.631
B7S416_PHATC
Predicted protein.
   
 
 0.624
B7G685_PHATC
Predicted protein.
   
 
  0.622
DHC1
Predicted protein.
    
 0.477
B7G7W5_PHATC
Predicted protein.
     
 0.451
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.