STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FWS5_PHATCSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (309 aa)    
Predicted Functional Partners:
B7G244_PHATC
Predicted protein.
   
 0.945
PAF1
PolyAdenylation factor subunit 1.
   
 0.942
B7FRF1_PHATC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
  
 
0.901
B7FTU7_PHATC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
  
 
0.901
B7G2E4_PHATC
Predicted protein.
   
 0.891
B7G9J3_PHATC
Predicted protein.
   
 0.888
B7FPE5_PHATC
Predicted protein.
    
 0.886
B7G4U2_PHATC
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.884
B7GER0_PHATC
Uncharacterized protein.
    
 0.826
B7G5N3_PHATC
Predicted protein.
 
 
 0.788
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.