STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FX04_PHATCPredicted protein. (257 aa)    
Predicted Functional Partners:
B7FUI2_PHATC
Predicted protein.
    
  0.991
B7FWT1_PHATC
Predicted protein.
   
 0.929
B7GAT6_PHATC
Predicted protein.
  
 0.925
B7FUW5_PHATC
Predicted protein.
  
  
 
0.916
B7GE76_PHATC
Predicted protein; Belongs to the adenylate kinase family.
    
 0.912
B7S454_PHATC
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
    
 0.912
B7G4G2_PHATC
Predicted protein.
     
  0.904
B7FQX9_PHATC
Predicted protein.
     
  0.900
B7FQY2_PHATC
Predicted protein.
     
  0.900
B7G5M9_PHATC
Predicted protein; Belongs to the protein kinase superfamily.
    
 0.887
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.