STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FX96_PHATCPredicted protein. (820 aa)    
Predicted Functional Partners:
B7FRH6_PHATC
Predicted protein.
   
 0.994
PHATR_1682
Anthranilate synthase. anthranilate synthetase. chorismate lyase.
  
 0.991
B7FSU3_PHATC
Predicted protein.
  
0.991
PHATR_44242
Predicted protein.
   
 0.989
B7FYZ4_PHATC
Predicted protein.
   
 0.986
B7FZI1_PHATC
Predicted protein.
   
 0.985
B7FT74_PHATC
Predicted protein.
   
 0.984
B7S3Y5_PHATC
Predicted protein.
   
 0.984
PHATR_46884
Predicted protein.
   
 0.982
B7G3Z5_PHATC
Predicted protein.
   
 0.976
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.