STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FXK2_PHATCPredicted protein. (570 aa)    
Predicted Functional Partners:
B7G038_PHATC
Predicted protein.
 
 
 0.969
B7FWT1_PHATC
Predicted protein.
  
  
 0.876
B7G610_PHATC
Predicted protein.
  
 
 0.753
B7G8S8_PHATC
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.753
B7G3G0_PHATC
Predicted protein.
  
  
 0.747
B7GDA7_PHATC
Predicted protein.
  
  
 0.747
B7G2B9_PHATC
Predicted protein.
  
  
 0.733
B7FRY0_PHATC
Predicted protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.717
CPS-II
Predicted protein.
  
 
 0.717
B7GEG8_PHATC
CPS III, carbamoyl-phosphate synthase mitochindrial.
  
 
 0.717
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.