STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FXL8_PHATCPredicted protein. (632 aa)    
Predicted Functional Partners:
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2.
   
 0.948
B7FUY0_PHATC
Predicted protein.
   
 0.934
PHATR_10628
Serine/threonine-protein kinase PLK.
   
 0.918
Pt-BUB3
WD40 mitotic checkpoint-like protein similar to spleen mitotic checkpoint BUB3.
   
 0.918
APC3
Predicted protein.
   
 0.912
APC6
Predicted protein.
   
 0.907
APC8
Predicted protein.
   
 0.905
APC10
Predicted protein.
    
 0.902
APC2
Predicted protein; Belongs to the cullin family.
   
 0.900
Pt-MAD1
Mitotic spindle assembly checkpoint protein.
   
 0.899
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.