STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FY73_PHATCPredicted protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (471 aa)    
Predicted Functional Partners:
PSAT
Phosphoserine transaminase.
 
 0.984
PGAM_3
Phosphoglycerate mutase.
    
 0.902
PGAM_1
Phosphoglycerate mutase.
    
 0.902
PGAM_2
Phosphoglycerate mutase.
    
 0.902
PGAM_6
Phosphoglycerate mutase.
    
 0.902
PGAM_5
Predicted protein.
    
 0.902
PGAM_4
Phosphoglycerate mutase.
    
 0.902
B7FY72_PHATC
2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 
0.901
PSP
Phosphoserine phosphatase.
  
 
 0.755
B7FRT7_PHATC
Predicted protein.
  
  
 0.707
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.