STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FZ80_PHATCPredicted protein. (460 aa)    
Predicted Functional Partners:
B7G8Q3_PHATC
Predicted protein.
  
 0.802
B7FP76_PHATC
Autophagy-related protein 3.
    
 0.746
B7GDM5_PHATC
Autophagy-related protein.
   
 0.745
B7FQG2_PHATC
Predicted protein.
  
 0.730
B7G8G3_PHATC
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.728
B7FYQ7_PHATC
Predicted protein.
    
 0.719
B7G0Q9_PHATC
Predicted protein.
   
 0.703
SUMO
Small ubiquitin-like modifier.
   
 0.703
UBI1/2
Ubiquitin extension protein 1/2.
   
 0.695
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
  
 0.624
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.