STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FZA8_PHATCPredicted protein; Belongs to the peptidase S1 family. (366 aa)    
Predicted Functional Partners:
B7FY78_PHATC
Predicted protein.
    
 0.769
B7FRU3_PHATC
Predicted protein.
   
 0.513
B7FYB0_PHATC
Predicted protein; Belongs to the globin family.
   
 0.513
B7FQ47_PHATC
Predicted protein.
    
 0.485
B7FY98_PHATC
Predicted protein.
    
 0.485
B7G088_PHATC
Predicted protein.
    
 0.485
B7GCP0_PHATC
Predicted protein.
    
 0.462
B7G7R8_PHATC
Predicted protein.
    
   0.448
PHATR_21122
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.409
B7FQY6_PHATC
Predicted protein.
   
 0.409
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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