STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G0L5_PHATCPredicted protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)    
Predicted Functional Partners:
B7G685_PHATC
Predicted protein.
   
 0.999
SAE2
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.998
B7FPC7_PHATC
Predicted protein.
    
 0.996
B7G0Q9_PHATC
Predicted protein.
   
 0.996
SUMO
Small ubiquitin-like modifier.
   
 0.996
B7FTF1_PHATC
Predicted protein.
    
 0.995
B7G7Z6_PHATC
Predicted protein.
    
 0.994
B7GAI0_PHATC
Predicted protein.
  
 0.991
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.989
B7GD99_PHATC
Predicted protein.
    
 
 0.988
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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