STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G0Y4_PHATCAmmonium transporter. (521 aa)    
Predicted Functional Partners:
GLNA
GLNA, glutamine synthase; Belongs to the glutamine synthetase family.
  
  
 0.749
B7G5A1_PHATC
Glutamine synthetase.
  
  
 0.712
B7FTV6_PHATC
Nitrate/nitrite transporter.
   
  
 0.645
B7FZW5_PHATC
Urea transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
 
 0.645
B7GBV6_PHATC
Purine permease.
   
  
 0.635
B7G997_PHATC
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
  
 0.610
B7G0L4_PHATC
Predicted protein.
      
 0.595
B7G195_PHATC
Predicted protein; Belongs to the small heat shock protein (HSP20) family.
      
 0.587
CHC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.565
HSP20
HSP20; Belongs to the small heat shock protein (HSP20) family.
      
 0.564
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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