STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G1I2_PHATCPredicted protein. (526 aa)    
Predicted Functional Partners:
B7FW14_PHATC
Predicted protein.
   
 
 0.649
B7FXH3_PHATC
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.590
B7FVU9_PHATC
Predicted protein.
   
 
 0.548
B7GEC7_PHATC
Predicted protein; Belongs to the DEAD box helicase family.
   
 
 0.512
B7GDQ3_PHATC
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.491
B7GAG2_PHATC
Phosphatase.
   
 
 0.489
B7FT97_PHATC
Predicted protein.
   
 
 0.459
B7G6P3_PHATC
Predicted protein.
    
 
 0.459
B7G8V7_PHATC
Predicted protein.
      
 0.446
B7FTN5_PHATC
Predicted protein.
   
 
 0.419
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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