STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G1K0_PHATCPredicted protein. (79 aa)    
Predicted Functional Partners:
B7FVY6_PHATC
Serine/threonine-protein phosphatase.
    
 0.573
B7FY78_PHATC
Predicted protein.
   
 0.520
B7G1P1_PHATC
Predicted protein.
  
 
  0.507
B7G8Q3_PHATC
Predicted protein.
   
 0.483
B7G3F9_PHATC
Predicted protein.
    
 0.461
B7GA35_PHATC
Predicted protein.
    
 0.461
UBI3
Ubiquitin extension protein 3.
    
  0.440
PsbO
Oxygen-evolving enhancer protein 1.
    
 
 0.439
B7FPT0_PHATC
Predicted protein; Belongs to the SKP1 family.
    
 0.435
UBI1/2
Ubiquitin extension protein 1/2.
    
  0.435
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.