Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADH_1 | ADH_2 | B7G307 | B7G0N4 | Alcohol dehydrogenase. | Alcohol dehydrogenase. | 0.595 |
ADH_1 | B7FP91_PHATC | B7G307 | B7FP91 | Alcohol dehydrogenase. | Predicted protein. | 0.558 |
ADH_1 | B7FPN7_PHATC | B7G307 | B7FPN7 | Alcohol dehydrogenase. | Aldehyde dehydrogenase. | 0.621 |
ADH_1 | B7FV66_PHATC | B7G307 | B7FV66 | Alcohol dehydrogenase. | Predicted protein. | 0.422 |
ADH_1 | B7FWP2_PHATC | B7G307 | B7FWP2 | Alcohol dehydrogenase. | Iron-containing dehydrogenase. | 0.861 |
ADH_1 | B7G0B2_PHATC | B7G307 | B7G0B2 | Alcohol dehydrogenase. | Homeobox protein. | 0.504 |
ADH_1 | B7G0U4_PHATC | B7G307 | B7G0U4 | Alcohol dehydrogenase. | Phosphoketolase. | 0.447 |
ADH_1 | MDH | B7G307 | B7GEG9 | Alcohol dehydrogenase. | Predicted protein; Belongs to the LDH/MDH superfamily. | 0.525 |
ADH_1 | MS | B7G307 | B7FYT9 | Alcohol dehydrogenase. | Malate synthase; Belongs to the malate synthase family. | 0.462 |
ADH_1 | PSY | B7G307 | B7FVW3 | Alcohol dehydrogenase. | Phytoene synthase. | 0.575 |
ADH_2 | ADH_1 | B7G0N4 | B7G307 | Alcohol dehydrogenase. | Alcohol dehydrogenase. | 0.595 |
ADH_2 | B7FPN7_PHATC | B7G0N4 | B7FPN7 | Alcohol dehydrogenase. | Aldehyde dehydrogenase. | 0.647 |
ADH_2 | B7FWP2_PHATC | B7G0N4 | B7FWP2 | Alcohol dehydrogenase. | Iron-containing dehydrogenase. | 0.853 |
ADH_2 | MDH | B7G0N4 | B7GEG9 | Alcohol dehydrogenase. | Predicted protein; Belongs to the LDH/MDH superfamily. | 0.464 |
B7FP91_PHATC | ADH_1 | B7FP91 | B7G307 | Predicted protein. | Alcohol dehydrogenase. | 0.558 |
B7FP91_PHATC | B7FWP2_PHATC | B7FP91 | B7FWP2 | Predicted protein. | Iron-containing dehydrogenase. | 0.853 |
B7FP91_PHATC | MDH | B7FP91 | B7GEG9 | Predicted protein. | Predicted protein; Belongs to the LDH/MDH superfamily. | 0.464 |
B7FPN7_PHATC | ADH_1 | B7FPN7 | B7G307 | Aldehyde dehydrogenase. | Alcohol dehydrogenase. | 0.621 |
B7FPN7_PHATC | ADH_2 | B7FPN7 | B7G0N4 | Aldehyde dehydrogenase. | Alcohol dehydrogenase. | 0.647 |
B7FPN7_PHATC | B7FV66_PHATC | B7FPN7 | B7FV66 | Aldehyde dehydrogenase. | Predicted protein. | 0.443 |
page 1 of 3