STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G4D5_PHATCPredicted protein. (346 aa)    
Predicted Functional Partners:
DDB1
Damage-specific DNA binding protein 1.
    
 0.855
B7G196_PHATC
2-hydroxyacid dehydrogenase.
   
 
 0.847
B7G5C4_PHATC
Predicted protein; Belongs to the protein kinase superfamily.
   
 
 0.847
B7GEM6_PHATC
Predicted protein; Belongs to the protein kinase superfamily.
   
 
 0.847
CUL1_2
CULlin protein 4; Belongs to the cullin family.
    
 0.814
B7G2J5_PHATC
Nucleotide-binding protein.
     
 0.797
NURF-55
Chromatin assembly factor subunit c.
     
0.792
B7G067_PHATC
Predicted protein.
   
 
 0.679
B7G6I6_PHATC
Predicted protein.
   
 
 0.679
B7G976_PHATC
Predicted protein.
   
 
 0.679
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.