STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G4K6_PHATCPredicted protein; Belongs to the universal ribosomal protein uL11 family. (164 aa)    
Predicted Functional Partners:
PHATR_46735
Predicted protein.
   
 0.999
PHATR_21073
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.999
rpl2-2
Predicted protein.
  
 0.999
PHATR_13361
Predicted protein; Belongs to the universal ribosomal protein uL3 family.
 
 0.999
PHATR_25577
Predicted protein.
   
 0.999
PHATR_43840
Predicted protein.
   
 0.999
PHATR_18559
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.999
PHATR_18585
Predicted protein.
   
 0.999
PHATR_25714
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
PHATR_10196
Ribosomal protein L37; Binds to the 23S rRNA.
   
 0.999
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.