STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G5G4_PHATCPhosphoglycerate kinase. (441 aa)    
Predicted Functional Partners:
TIM_1
Triosephosphate isomerase.
 
 0.996
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.985
B7FSQ0_PHATC
Triosephosphate isomerase.
 
 
 0.970
GAPDH_3
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.968
GapC2a
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.965
B7FT67_PHATC
Triosephosphate isomerase.
 
 
 0.963
GapC4
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.957
GapC1
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.957
PGAM_3
Phosphoglycerate mutase.
   
 0.940
PGAM_1
Phosphoglycerate mutase.
   
 0.940
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.