STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL1_1CULlin protein 3; Belongs to the cullin family. (762 aa)    
Predicted Functional Partners:
B7FU62_PHATC
Predicted protein.
    
 0.998
Rbx1
Predicted protein.
    
 0.935
B7GD99_PHATC
Predicted protein.
   
 0.925
B7G1U8_PHATC
Predicted protein.
   
 0.923
B7G8G3_PHATC
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.902
CSN1
COP9 SigNalosome subunit 1.
    
 0.865
CSN4
COP9 SigNalosome subunit 4.
  
 0.864
B7G290_PHATC
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.855
CSN5
COP9 SigNalosome subunit 5.
    
 0.849
PHATR_44003
Predicted protein.
    
 0.819
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.