STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G8C2_PHATCPredicted protein. (351 aa)    
Predicted Functional Partners:
AOX1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.721
B7GEQ9_PHATC
Predicted protein.
    
 0.661
B7G8L4_PHATC
Predicted protein.
  
 
 0.660
B7GAH4_PHATC
Predicted protein.
     
 0.659
PHATR_25572
Predicted protein.
   
 0.654
B7FPQ8_PHATC
Predicted protein.
     
 0.651
B7G399_PHATC
Peroxisomal membrane protein PEX16.
    
 0.641
B7GCN0_PHATC
Predicted protein; Belongs to the aldehyde dehydrogenase family.
    
 0.639
ACD1
Short chain acyl-coenzyme A dehydrogenase.
   
 0.603
B7FZ70_PHATC
Predicted protein.
   
 0.603
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.