STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G9F0_PHATCAcetyl-coenzyme A synthetase. (675 aa)    
Predicted Functional Partners:
B7G9P5_PHATC
Citrate synthase; Belongs to the citrate synthase family.
  
 0.980
MS
Malate synthase; Belongs to the malate synthase family.
  
 0.972
B7GCN0_PHATC
Predicted protein; Belongs to the aldehyde dehydrogenase family.
  
 0.963
B7GDK2_PHATC
Acetyl-coa c-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.963
AOX1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.956
ACD1
Short chain acyl-coenzyme A dehydrogenase.
  
 
 0.942
HAD2
3-hydroxyacyl-coenzyme A dehydrogenase.
  
 
 0.939
ACC1
Acetyl-coa carboxylase.
  
 0.938
ACC2
Biotin carboxylase.
  
 0.938
B7FUP6_PHATC
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.937
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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