STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7GA07_PHATCPredicted protein. (379 aa)    
Predicted Functional Partners:
B7FTF1_PHATC
Predicted protein.
    
 0.998
B7G7Z6_PHATC
Predicted protein.
    
 0.797
B7G365_PHATC
Predicted protein.
 
 
  
0.795
B7FSM1_PHATC
Predicted protein.
    
 0.778
B7FUL5_PHATC
Predicted protein.
    
 0.778
B7G671_PHATC
Predicted protein.
    
 0.700
B7G101_PHATC
Absent, small, or homeotic discs 2.
    
 0.696
Sec13
Predicted protein; Belongs to the WD repeat SEC13 family.
  
 
 0.683
PHATR_21122
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
   
 0.678
UBI1/2
Ubiquitin extension protein 1/2.
 
  
 0.646
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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