Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B7FR06_PHATC | B7FUB2_PHATC | B7FR06 | B7FUB2 | Predicted protein. | Predicted protein. | 0.699 |
B7FR06_PHATC | B7G080_PHATC | B7FR06 | B7G080 | Predicted protein. | Predicted protein. | 0.699 |
B7FR06_PHATC | B7G5J0_PHATC | B7FR06 | B7G5J0 | Predicted protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.798 |
B7FR06_PHATC | B7GA23_PHATC | B7FR06 | B7GA23 | Predicted protein. | Predicted protein. | 0.579 |
B7FR06_PHATC | PHATR_33257 | B7FR06 | B5Y4S8 | Predicted protein. | Predicted protein. | 0.828 |
B7FUB2_PHATC | B7FR06_PHATC | B7FUB2 | B7FR06 | Predicted protein. | Predicted protein. | 0.699 |
B7FUB2_PHATC | B7G5J0_PHATC | B7FUB2 | B7G5J0 | Predicted protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.887 |
B7FUB2_PHATC | B7G818_PHATC | B7FUB2 | B7G818 | Predicted protein. | Predicted protein. | 0.699 |
B7FUB2_PHATC | B7GA23_PHATC | B7FUB2 | B7GA23 | Predicted protein. | Predicted protein. | 0.571 |
B7FUB2_PHATC | CCL1 | B7FUB2 | B7FT13 | Predicted protein. | Coumaryl-coa ligase. | 0.699 |
B7FUB2_PHATC | PHATR_33257 | B7FUB2 | B5Y4S8 | Predicted protein. | Predicted protein. | 0.914 |
B7G080_PHATC | B7FR06_PHATC | B7G080 | B7FR06 | Predicted protein. | Predicted protein. | 0.699 |
B7G080_PHATC | B7G5J0_PHATC | B7G080 | B7G5J0 | Predicted protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.887 |
B7G080_PHATC | B7G818_PHATC | B7G080 | B7G818 | Predicted protein. | Predicted protein. | 0.699 |
B7G080_PHATC | B7GA23_PHATC | B7G080 | B7GA23 | Predicted protein. | Predicted protein. | 0.571 |
B7G080_PHATC | CCL1 | B7G080 | B7FT13 | Predicted protein. | Coumaryl-coa ligase. | 0.699 |
B7G080_PHATC | PHATR_33257 | B7G080 | B5Y4S8 | Predicted protein. | Predicted protein. | 0.914 |
B7G3I2_PHATC | B7GA23_PHATC | B7G3I2 | B7GA23 | V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. | Predicted protein. | 0.710 |
B7G3I2_PHATC | B7GDY0_PHATC | B7G3I2 | B7GDY0 | V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. | Predicted protein. | 0.999 |
B7G3I2_PHATC | PHATR_21030 | B7G3I2 | B5Y3H8 | V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. | V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family. | 0.999 |
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