STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7GAW2_PHATCL-galactono-1,4-lactone dehydrogenase. (572 aa)    
Predicted Functional Partners:
B7G1J9_PHATC
L-ascorbate peroxidase; Belongs to the peroxidase family.
     
 0.900
B7G1V7_PHATC
L-ascorbate peroxidase; Belongs to the peroxidase family.
     
  0.900
B7G386_PHATC
Predicted protein; Belongs to the peroxidase family.
     
 0.900
B7FS18_PHATC
Predicted protein.
    
   0.830
B7FUG8_PHATC
Glycolate oxidase.
  
 0.663
GOX
Glycolate oxidase.
  
 0.663
B7FZ93_PHATC
Predicted protein.
  
 
 0.603
B7FQS4_PHATC
Predicted protein.
  
 
 0.600
PHATR_43944
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
   0.592
B7FNZ8_PHATC
Predicted protein.
      
 0.577
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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