STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7GBG3_PHATCPredicted protein. (200 aa)    
Predicted Functional Partners:
B7G2E3_PHATC
Predicted protein.
  
 0.974
B7FUS0_PHATC
Predicted protein.
     
 0.955
B7FRZ0_PHATC
Predicted protein.
  
 
 0.919
B7G1T6_PHATC
Predicted protein; Belongs to the cytochrome c oxidase subunit 6A family.
     
  0.900
RFC3
Predicted protein.
 
      0.899
B7FTH9_PHATC
Predicted protein.
 
 
    0.896
B7S471_PHATC
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
  
 
 0.888
B7S3T1_PHATC
Predicted protein.
  
 
 0.829
B7G6J9_PHATC
Predicted protein.
  
 
 0.818
PHATR_20948
Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.794
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.