STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7S432_PHATCPredicted protein. (464 aa)    
Predicted Functional Partners:
AAT_1
Aspartate transaminase.
   
 0.973
B7FWY4_PHATC
Predicted protein.
  
 
 0.946
AAT_2
Aspartate aminotransferase.
   
 0.943
B7G3X3_PHATC
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.940
ME1
Predicted protein.
  
 0.933
B7FZD7_PHATC
Malic enzyme.
  
 0.933
B7G0P4_PHATC
Predicted protein.
    
 0.914
PPdK
Predicted protein.
     
 0.911
B7FUP3_PHATC
Predicted protein.
  
 
 0.907
B7FUH0_PHATC
Predicted protein.
  
  
 
0.902
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.