STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7S490_PHATCalpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (489 aa)    
Predicted Functional Partners:
B7G5V7_PHATC
Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.
     
  0.900
PHATR_50770
Predicted protein; Belongs to the FGGY kinase family.
 
      0.686
B7G5X5_PHATC
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
0.559
B7G4N6_PHATC
UDP-glucose:glycoprotein glucosyltransferase.
  
 
 0.544
B7G412_PHATC
Alpha mannosidase.
   
 
 0.519
B7G690_PHATC
Predicted protein.
      
 0.483
B7FVS9_PHATC
Predicted protein.
      
 0.482
B7FUJ6_PHATC
Mannosyltransferase.
      
 0.481
PHATR_52108
Alpha-mannosidase.
      
 0.449
B7G7B4_PHATC
Predicted protein.
      
 0.445
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.