STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH36970.1Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (342 aa)    
Predicted Functional Partners:
SDH37001.1
Iron complex transport system ATP-binding protein.
 
 0.998
SDG77373.1
Iron complex transport system ATP-binding protein.
 
 0.995
SDH36933.1
Iron complex transport system substrate-binding protein.
 
 0.993
hmuV
Iron complex transport system ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.992
SDH25305.1
Vitamin B12 transport system substrate-binding protein.
 
 0.959
SDG77293.1
Iron complex transport system substrate-binding protein.
 
 0.929
SDH37025.1
Predicted metal-binding protein.
  
    0.802
SDH36904.1
cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
 0.793
SDH37094.1
Cobaltochelatase CobN.
  
  
 0.713
SDH37122.1
Magnesium chelatase subunit I.
       0.688
Your Current Organism:
Pseudomonas benzenivorans
NCBI taxonomy Id: 556533
Other names: CIP 109857, DSM 8628, P. benzenivorans, Pseudomonas benzenivorans Lang et al. 2012 emend. Hameed et al. 2014, Pseudomonas sp. DSM 8628
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.