STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH65029.1CBS domain-containing protein. (438 aa)    
Predicted Functional Partners:
SDH65000.1
Response regulator receiver domain-containing protein.
 
 0.979
SDI21241.1
PAS domain S-box-containing protein.
 
0.952
SDG74445.1
Na+/proline symporter.
 
 0.942
SDH55787.1
PAS domain S-box-containing protein.
0.938
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 0.930
SDG37614.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.919
SDG69698.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
0.913
SDG25940.1
Two-component system, cell cycle response regulator DivK.
 
 0.903
SDH85370.1
Response regulator receiver domain-containing protein.
 
 0.895
SDH16792.1
Signal transduction histidine kinase.
 
0.891
Your Current Organism:
Pseudomonas benzenivorans
NCBI taxonomy Id: 556533
Other names: CIP 109857, DSM 8628, P. benzenivorans, Pseudomonas benzenivorans Lang et al. 2012 emend. Hameed et al. 2014, Pseudomonas sp. DSM 8628
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