STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_10917AF4/FMR2 family member 4. (1160 aa)    
Predicted Functional Partners:
N303_14372
Cyclin-T1; Belongs to the cyclin family.
   
 0.991
N303_06079
Cyclin-dependent kinase 9.
    
 0.988
N303_03040
Cyclin-T2; Belongs to the cyclin family.
   
 0.946
N303_10770
Protein AF-9.
    
 0.931
N303_12775
ELL-associated factor 2.
    
 0.925
N303_10946
ELL-associated factor 1.
    
 0.920
N303_15338
RNA polymerase II elongation factor ELL.
   
 0.908
N303_04850
RNA polymerase II elongation factor ELL2.
   
 0.908
N303_13499
Adenylate kinase 9.
    
  0.868
N303_13498
Adenylate kinase 9.
    
  0.868
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.