STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1019 aa)    
Predicted Functional Partners:
N303_09049
Nucleolar protein 10.
   
 
 0.999
N303_08499
Nucleolar protein 58.
   
 
 0.999
N303_14982
Periodic tryptophan protein 2.
   
 
 0.999
N303_07101
Small subunit processome component 20.
   
 
 0.999
N303_09379
Nucleolar protein 14.
   
 
 0.999
N303_14026
Ribosome biogenesis protein BMS1.
   
 
 0.999
N303_14850
Nucleolar protein 6.
   
 
 0.999
N303_06498
U3 small nucleolar RNA-associated protein 14 A.
   
 
 0.999
N303_01700
Protein RRP5.
   
 
 0.998
N303_14005
WD repeat-containing protein 36.
   
 
 0.998
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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