STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_11133Vesicle-associated membrane protein-associated protein B. (228 aa)    
Predicted Functional Partners:
N303_15445
StAR-related lipid transfer protein 3.
    
 0.965
N303_01603
Vesicle-associated membrane protein-associated protein A.
  
0.954
N303_03595
Cyclic AMP-dependent transcription factor ATF-6 alpha.
     
 0.909
N303_05873
B-cell receptor-associated protein 29.
   
 0.842
N303_06635
MLN64 N-terminal domain.
    
 0.783
N303_00490
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
    
 0.720
N303_09299
Oxysterol-binding protein 1.
    
 0.714
N303_13651
Oxysterol-binding protein 1.
    
 0.714
N303_07263
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.707
N303_12205
Oxysterol-binding protein-related protein 3.
    
 0.707
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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