STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_11745OTU domain-containing protein 4. (1105 aa)    
Predicted Functional Partners:
N303_11545
Ubiquitin-40S ribosomal protein S27a.
    
 0.822
N303_15335
Ubiquitin-60S ribosomal protein L40.
    
  0.768
N303_02186
Polyubiquitin-C.
    
 0.709
N303_00350
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.666
N303_08682
2'-5'-oligoadenylate synthase-like 1.
    
 0.666
N303_08706
Ubiquilin-4.
    
 0.642
N303_07699
Nuclear pore complex protein Nup153.
  
    0.602
N303_05094
Zinc finger protein 598.
    
 
 0.596
N303_00826
E3 ubiquitin-protein ligase RNF216.
    
 0.557
N303_09412
Histone H2A deubiquitinase MYSM1.
   
  
 0.550
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.