STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_03706Scaffold attachment factor B1. (814 aa)    
Predicted Functional Partners:
N303_09972
Transformer-2 protein beta.
   
 0.689
N303_06313
Transformer-2 protein alpha.
   
 0.676
N303_08731
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 0.634
N303_12323
Serine/arginine-rich splicing factor 2.
   
 
 0.601
N303_13144
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 0.600
N303_15706
Small ubiquitin-related modifier.
    
 0.585
N303_11039
Small ubiquitin-related modifier.
    
 0.585
N303_15016
Heterogeneous nuclear ribonucleoprotein M.
   
 0.577
N303_10518
Cleavage stimulation factor subunit 2.
  
 0.557
N303_12916
Serine/arginine-rich splicing factor 3.
   
 0.529
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.