STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_11736Ribonuclease H1. (208 aa)    
Predicted Functional Partners:
N303_13161
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.930
N303_12947
Thymidylate synthase.
  
 
 0.930
N303_15805
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.902
N303_05581
Uncharacterized protein.
   
 
 0.888
N303_06840
Iodotyrosine dehalogenase 1.
    
 0.868
N303_05243
Peroxisomal NADH pyrophosphatase NUDT12.
   
  0.858
N303_02345
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
 0.855
N303_15787
Triosephosphate isomerase.
    
 0.847
N303_11735
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene); Belongs to the acireductone dioxygenase (ARD) family.
 
    
 0.845
N303_00404
Thymidine kinase.
    
  0.844
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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