STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_08995Sorting nexin-11. (163 aa)    
Predicted Functional Partners:
N303_12622
Vacuolar protein sorting-associated protein 35.
    
 0.909
N303_07616
Ribosomal protein S6 kinase delta-1.
     
 0.848
N303_10854
Vacuolar protein sorting-associated protein 26B.
    
 0.846
N303_10461
Vacuolar protein sorting-associated protein 26A.
    
 0.846
N303_14420
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 0.781
N303_09457
Protein wntless.
    
 0.741
N303_10125
Ubiquitin carboxyl-terminal hydrolase 10.
    
 0.615
N303_04794
Sorting nexin-24.
     
 0.550
N303_05757
Sorting nexin-22.
     
 0.507
N303_08289
Tubulin polyglutamylase TTLL13.
      
 0.444
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.