STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_02475Ankyrin repeat and SAM domain-containing protein 6. (179 aa)    
Predicted Functional Partners:
N303_04381
Ankyrin repeat and SAM domain-containing protein 3.
    
 
 0.962
N303_12161
Serine/threonine-protein kinase Nek8.
    
 
 0.749
N303_15382
Nephrocystin-3.
   
 0.688
N303_03621
Serine/threonine-protein kinase Nek7; Belongs to the protein kinase superfamily.
    
 
 0.664
N303_06242
Serine/threonine-protein kinase Nek6; Belongs to the protein kinase superfamily.
    
 
 0.664
N303_01830
Serine/threonine-protein kinase Nek9.
    
 0.657
N303_12104
Rab-like 5.
    
 0.631
N303_14445
Intraflagellar transport protein 81.
    
 0.627
N303_01297
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.582
N303_04994
Inversin.
    
 
 0.581
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.