STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_09499Ubiquitin carboxyl-terminal hydrolase. (952 aa)    
Predicted Functional Partners:
N303_02186
Polyubiquitin-C.
    
 0.828
N303_05901
Squamous cell carcinoma antigen recognized by T-cells 3.
    
 
 0.807
N303_15335
Ubiquitin-60S ribosomal protein L40.
    
  0.757
N303_06802
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.751
N303_04620
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.746
N303_15629
E3 ubiquitin-protein ligase SMURF2.
    
 0.739
N303_04241
Mothers against decapentaplegic 7.
    
 0.694
N303_09412
Histone H2A deubiquitinase MYSM1.
   
 
 0.677
N303_11545
Ubiquitin-40S ribosomal protein S27a.
    
 0.666
N303_13161
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.654
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.