Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N303_01432 | N303_05240 | A0A091GAT2 | A0A091FV25 | Dynein light chain roadblock-type 1. | Dynactin subunit 1. | 0.664 |
N303_01432 | N303_05241 | A0A091GAT2 | A0A091GFD0 | Dynein light chain roadblock-type 1. | Dynactin subunit 1. | 0.664 |
N303_01432 | N303_08565 | A0A091GAT2 | A0A091G4X1 | Dynein light chain roadblock-type 1. | Dynein intermediate chain 2, axonemal. | 0.844 |
N303_01432 | N303_08723 | A0A091GAT2 | A0A091FLU3 | Dynein light chain roadblock-type 1. | Dynein heavy chain 10, axonemal. | 0.844 |
N303_01432 | N303_09917 | A0A091GAT2 | A0A091H629 | Dynein light chain roadblock-type 1. | Dynein light chain. | 0.945 |
N303_01432 | N303_10590 | A0A091GAT2 | A0A091G669 | Dynein light chain roadblock-type 1. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | 0.555 |
N303_01432 | N303_10592 | A0A091GAT2 | A0A091GUU2 | Dynein light chain roadblock-type 1. | Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. | 0.555 |
N303_01432 | N303_14880 | A0A091GAT2 | A0A091GFZ5 | Dynein light chain roadblock-type 1. | Dynactin subunit 2. | 0.751 |
N303_05240 | N303_01432 | A0A091FV25 | A0A091GAT2 | Dynactin subunit 1. | Dynein light chain roadblock-type 1. | 0.664 |
N303_05240 | N303_05241 | A0A091FV25 | A0A091GFD0 | Dynactin subunit 1. | Dynactin subunit 1. | 0.900 |
N303_05240 | N303_07773 | A0A091FV25 | A0A091G2Z7 | Dynactin subunit 1. | TBC1 domain family member 31. | 0.785 |
N303_05240 | N303_08565 | A0A091FV25 | A0A091G4X1 | Dynactin subunit 1. | Dynein intermediate chain 2, axonemal. | 0.761 |
N303_05240 | N303_08723 | A0A091FV25 | A0A091FLU3 | Dynactin subunit 1. | Dynein heavy chain 10, axonemal. | 0.812 |
N303_05240 | N303_09917 | A0A091FV25 | A0A091H629 | Dynactin subunit 1. | Dynein light chain. | 0.701 |
N303_05240 | N303_14880 | A0A091FV25 | A0A091GFZ5 | Dynactin subunit 1. | Dynactin subunit 2. | 0.986 |
N303_05240 | PAFAH1B1 | A0A091FV25 | A0A091GF22 | Dynactin subunit 1. | Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. | 0.837 |
N303_05241 | N303_01432 | A0A091GFD0 | A0A091GAT2 | Dynactin subunit 1. | Dynein light chain roadblock-type 1. | 0.664 |
N303_05241 | N303_05240 | A0A091GFD0 | A0A091FV25 | Dynactin subunit 1. | Dynactin subunit 1. | 0.900 |
N303_05241 | N303_07773 | A0A091GFD0 | A0A091G2Z7 | Dynactin subunit 1. | TBC1 domain family member 31. | 0.785 |
N303_05241 | N303_08565 | A0A091GFD0 | A0A091G4X1 | Dynactin subunit 1. | Dynein intermediate chain 2, axonemal. | 0.761 |
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