STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_05467Mitoferrin-1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (266 aa)    
Predicted Functional Partners:
N303_02077
AA_TRNA_LIGASE_II domain-containing protein.
 
   
  0.937
N303_10765
Uncharacterized protein.
    
 
 0.656
N303_04322
RBR-type E3 ubiquitin transferase.
 
      0.541
N303_03360
Asparagine--tRNA ligase, cytoplasmic.
 
   
  0.503
N303_07731
Magnesium transporter.
    
 
 0.499
N303_07833
Uncharacterized protein.
    
 
 0.461
N303_02560
Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
0.405
N303_15775
Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
0.405
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.