STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_00658AT-rich interactive domain-containing protein 1B. (1618 aa)    
Predicted Functional Partners:
N303_07562
Putative global transcription activator SNF2L2.
   
 0.996
N303_13472
SWI/SNF complex subunit SMARCC1.
   
 0.995
N303_00625
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1.
    
 0.994
N303_09709
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 0.992
N303_10320
Actin-like 6A; Belongs to the actin family.
    
 0.983
N303_00583
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2.
    
 0.974
N303_09412
Histone H2A deubiquitinase MYSM1.
   
 0.972
N303_01324
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1.
    
 0.964
N303_14461
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3.
    
 0.964
N303_05380
Zinc finger protein DPF3.
    
 0.959
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.