STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_04353Deoxyribonuclease-1-like 2. (281 aa)    
Predicted Functional Partners:
N303_06935
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 0.780
N303_15052
Paired amphipathic helix protein Sin3b.
    
 0.777
N303_04280
Paired amphipathic helix protein Sin3a.
    
 0.777
N303_05243
Peroxisomal NADH pyrophosphatase NUDT12.
    
 0.715
N303_14906
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
     
 0.704
N303_05453
Inhibitor of nuclear factor kappa-B kinase subunit beta.
    
 0.696
N303_04515
Serine/threonine-protein kinase TBK1.
    
 0.696
N303_09620
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
    
 0.696
N303_05352
Inhibitor of nuclear factor kappa-B kinase subunit epsilon.
    
 0.696
N303_02487
Succinate dehydrogenase (quinone); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
 0.694
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.