STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_09194Ankyrin repeat domain-containing protein 22. (192 aa)    
Predicted Functional Partners:
N303_14445
Intraflagellar transport protein 81.
    
 0.627
N303_12104
Rab-like 5.
    
 0.594
N303_01297
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.582
N303_01466
Intraflagellar transport protein 52.
    
 0.575
N303_05088
E3 ubiquitin-protein ligase TRAF7.
    
 0.570
N303_07259
Tetratricopeptide repeat protein 30A1.
    
 0.568
N303_09193
AMSH-like protease.
    
 0.567
N303_14544
Baculoviral IAP repeat-containing protein 6.
    
 0.566
N303_00949
Putative ankyrin repeat domain-containing protein 31.
  
 
 0.563
N303_03248
Intraflagellar transport protein 57.
    
 0.562
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.