STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_08805GA-binding protein subunit beta-1. (382 aa)    
Predicted Functional Partners:
N303_13753
GA-binding protein alpha chain.
    
 0.987
N303_15767
Caspase-2; Belongs to the peptidase C14A family.
    
  0.738
N303_03012
Tumor protein 63 (p63); Acts as a sequence specific DNA binding transcriptional activator or repressor. The isoforms contain a varying set of transactivation and auto-regulating transactivation inhibiting domains thus showing an isoform specific activity. May be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes.
    
  0.720
N303_12295
Cathepsin B; Belongs to the peptidase C1 family.
    
   0.696
N303_14445
Intraflagellar transport protein 81.
    
 0.627
N303_11987
Tumor protein D54.
    
  0.599
N303_12014
Intraflagellar transport protein 80.
   
 0.595
N303_12104
Rab-like 5.
    
 0.594
N303_01297
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.582
N303_01466
Intraflagellar transport protein 52.
    
 0.575
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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