STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_06656Highly divergent homeobox. (696 aa)    
Predicted Functional Partners:
N303_05886
RAD50-interacting protein 1.
    
 0.850
N303_00416
Syntaxin-18.
    
 0.824
N303_15057
Vesicle transport protein USE1.
    
 0.818
N303_13004
Centromere/kinetochore protein zw10.
    
 0.804
N303_12868
Neuroblastoma-amplified sequence.
    
 0.758
N303_12768
Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family.
   
 0.694
N303_03739
Vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family.
   
 0.694
N303_11567
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.694
N303_03123
Coatomer subunit beta.
    
 0.623
N303_12833
Vesicle-fusing ATPase.
    
 0.614
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.